1 | Y .Aydın Son

ÖZGEÇMİŞ VE ESERLER LİSTESİ
ÖZGEÇMİŞ
Adı Soyadı: YEŞİM AYDIN SON
Doğum Tarihi: 6 MART 1976
Öğrenim Durumu: Doktora ( M.D., Ph.D. )
Derece
Bölüm/Program
Üniversite
Yıl
Y. Lisans
TIP FAKÜLTESİ
HACETTEPE ÜNİVERSİTESİ
1999
Doktora
Life Sciences / Graduate
School of Genome
Science and Technology
UNIVERSITY of TENNEESSEE,
Knoxville
2006
Doktora Tezi/S.Yeterlik Çalışması/Tıpta Uzmanlık Tezi Başlığı (özeti ekte) ve
Danışmanı :
Tez başlığı: “Differential Expression of Skin Cancer and Hair-Follicle Cycle Regulated
Genes in Tumor Susceptible K14-Agouti Mice”
Tez danışmanı: Prof. Edward J. Michaud
Görevler:
Görev
Unvanı
Yardımcı
Doçent
Öğretim
Görevlisi
Uzman
Araştırma
Görevlisi
Araştırma
Görevlisi
Görev Yeri
Yıl
Ortadoğu Teknik Üniversitesi Enformatik Enstitüsü Sağlık
Bilişimi EABD
2010-halen
Ortadoğu
Teknik
Üniversitesi
Biyoenformatik Programı
2009-2010
Enformatik
Enstitüsü
City of Hope National Medical Center, Duarte, CA, USA
2007-2009
Oak Ridge National Laboratories- Oak Ridge, TN, USA
2002-2006
University of Tennessee- Knoxville, TN, USA
2000-2002
1 | Y .Aydın Son
Yönetilen Yüksek Lisans Tezleri :
1
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Ceyhun Gedikoğlu
Tez Başlığı: “Integration Of Metu-Snp Databases Via Rdf For Pi-Snp Web Service”
Mezuniyet yılı: Ocak, 2014
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
Ortak yönetici: Dr.Levent Çarkacıoğlu
2
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Gökçe Oğuz
Tez Başlığı: “Cytokine Polymorphism Catalog (Cytocat) For The Analysıs Of Phenotype
Assocıatıons”
Mezuniyet yılı: Ocak, 2014
Tez yöneticisi: Y.Doç.Dr.Aybar Can ACAR
Ortak yönetici: Y.Doç.Dr.Yeşim AYDIN SON
3
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Erhan Akdemir
Tez Başlığı: “A Framework For Gene Coexpression Network Analysis Of Lung Cancer”
Mezuniyet yılı: Ekim, 2013
Tez yöneticisi: Doç.Dr.Tolga CAN
Ortak yönetici: Y.Doç.Dr.Yeşim AYDIN SON
4
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Hüseyin Alper DÖM
Tez Başlığı: “Investigation of Schizophrenia Related Genes And Pathways Through
Genome Wide Association Studies”
Mezuniyet yılı: Ocak, 2013
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
5
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Onur Erdoğan
Tez Başlığı: “Predicting The Disease Of Alzheimer (AD) With SNP Biomarkers And
Clinical Data Based Decision Support System Using Data Mining Classification
Approaches”
Mezuniyet yılı: Eylül, 2012
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
6
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Burak Demiralay
Tez Başlığı: “Investigation of Human Promoter CpG Content and Methylation Profiles at
Different Conservation Levels”
Mezuniyet yılı: Haziran, 2012
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
7
Derece: Yüksek Lisans
Öğrenci Adı-Soyadı: Onat Kadıoğlu
Tez Başlığı: “Determination of Performance Parameters For AHP Based SNP Prioritization
Approach On Alzheimer’s Disease Data”
Mezuniyet yılı: Eylül, 2011
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
2 | Y .Aydın Son
Yönetilen Doktora Tezleri :
1
Derece: Doktora
Öğrenci Adı-Soyadı: Timur Beyan
Tez Başlığı: “Single Nucletide Polymorphism (SNP) Data Integrated Electronic Health
Record (EHR) For Personalized Medicine”
Mezuniyet yılı: Ocak, 2014
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
2
Derece: Doktora
Öğrenci Adı-Soyadı: Hüsamettin Gül
Tez Başlığı: “A Predictive Model For Type 2 Diabetes Mellitus Based On Genomic And
Phenotypic Risk Factors”
Mezuniyet yılı: Ocak, 2014
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
3
Derece: Doktora
Öğrenci Adı-Soyadı: Sait Can Yücebaş
Tez Başlığı: “A Predictive Model For Type 2 Diabetes Mellitus Based On Genomic And
Phenotypic Risk Factors”
Mezuniyet yılı: Eylül, 2013
Tez yöneticisi: Prof.Dr.Nazife Baykal
Ortak Yönetici: Y.Doç.Dr.Yeşim AYDIN SON
4
Derece: Doktora
Öğrenci Adı-Soyadı: Gürkan Üstünkar
Tez Başlığı: “An Integrative Approach to Structured SNP Prioritization And
Representative SNP Selection For Genome-Wide Association Studies”
Mezuniyet yılı: Ocak, 2011
Tez yöneticisi: Y.Doç.Dr.Yeşim AYDIN SON
Ortak Yönetici: Prof.Dr. Gerhard Wielhem WEBER
Projelerde Yaptığı Görevler :
1) TUBİTAK 2236 Co-Funded Brain Circulation: Multi-dimensional modelling of the
disease networks in atomic detail by data integration across several cancer types ,
ODTÜ Enformatik Enstitüsü, Ankara
Projedeki rol: Proje yürütücüsü (supervising host scientist), Haziran 2014-2016
2) EUROSTAR TUBİTAK AGY-103-02: “BeeMonitor” Development of Rapid Multi-Test
for diagnosis of viral infections contributing to colony collapse disorder of honeybees,
METUTECH-GENformatik Ltd. Şti, Ankara
Projedeki rol: Araştırmacı, Mayıs 2013-2015
3) BİLİM, SANAYİ VE TEKNOLOJİ BAKANLIĞI TEKNOGİRİŞİM SERMAYESİ
DESTEĞİ: “p-SNP kit: İlaç Etkinliği Test Kiti”, METUTECH-GENformatik Ltd. Şti,
Ankara
Projedeki rol: Danışman ve kurucu ortak, Haziran 2012-2013, tamamlandı
4) METU BAP-1 PROJESİ (BAP-08-11-2011-117): METUSNP: SNP biobelirteçlerinin
Analizi ve Hastalıklarla İlişkilendirmesi Yazılımının Geliştirilmesi ve web servislerinin
kurulması, ODTÜ Enformatik Enstitüsü, Ankara,
Projedeki rol: Proje yürütücüsü, Ocak 2011-2013, tamamlandı
3 | Y .Aydın Son
İdari Görevler :
ODTÜ Enformatik Enstitüsü, Sağlık Bilişimi EABD Başkanı (2012-halen)
ODTÜ Enformatik Enstitüsü, Enstitü Kurulu, Üye (2012-halen)
ODTÜ Enformatik Enstitüsü, Kalite Kontrol Komitesi, Üye (2012-halen)
ODTÜ Enformatik Enstitüsü, Yönetim Kurulu, Üye (2011-2012)
University of TN, Knoxville, Graduate School of GST,
Student Advising Committee, Student member (2001-2004)
Bilimsel Kuruluşlara Üyelikler :
Tıp Bilişimi Derneği, Yönetim Kurulu Sekreteri (2014- halen)
Beyin Araştırmaları Uygulama ve Araştırma Merkezi (BAUM),
Danışma Kurulu Üyesi (2013-halen)
Vision2020, METU Champion for Health (2013 to halen)
Turkish Bioinformatics Society, Üye (2011 to halen)
ISCB, International Society of Computational Biology, Üye (2011 to halen )
Ödüller :
2014
ODTÜ Geliştirme Vakfı Makale Ödülü
2012
ODTÜ Akademik Performans Ödülü
2012
ODTÜ Geliştirme Vakfı Makale Ödülü
2011
iGEM, International Genetically Engineered Machines Competition, Amsterdam,
Holland, Silver Medal Degree at European Regionals and
Qualified for the World
Championship with the Mining for BioBricks Project, Co-advisor of the METU-BIN Team
competing at software track
2011 iGEM BEST USE OF REGISTRY AWARD and second place at software track at the
World Championship, 5-7 November 2011, MIT, Cambridge,MA, USA
2011 TEKNOVASYON 2011,
Competition, Mansiyon Ödülü
PFIZER
Heath
Sciences
and
Technologies
Project
2011
4th International Congress on Psychopharmacology Kongresi Poster Ödülü
2011
6th Health Informatics and Bioinformatics International Symposıum, Poster Ödülü
2010 iGEM, International Genetically Engineered Machines Competition Silver Medal
Degree with the Bio-Guide Project at MIT, Cambridge, USA,Co-advisor of METU-Software
Team
4 | Y .Aydın Son
Son iki yılda verdiği lisans ve lisansüstü düzeydeki dersler:
Yıl /
Dönem
Ders Adı
Öğrenci
Sayısı
Teorik/Uygulama
Ders Saati
2013-2014
/ İlkbahar
MICROARRAY DATA ANALYSIS AND
INFORMATICS
14
30
2013-2014
/ Güz
INTRODUCTION TO MEDICAL
INFORMATICS
12
30
2013-2014
/ Güz
FUTURE STUDIES FOR HEALTHCARE
8
30
2013-2014
/ Güz
PROTEIN AND DNA SEQUENCE
ANALYSIS
35
30
2012-2013
/ İlkbahar
BIOLOGICAL DATABASES AND DATA
ANALYSIS TOOLS
9
33
2012-2013
/ İlkbahar
MICROARRAY DATA ANALYSIS AND
INFORMATICS
12
30
2012-2013
/ İlkbahar
PROTEIN AND DNA SEQUENCE
ANALYSIS
10
30
2012-2013
/ Güz
INTRODUCTION TO MEDICAL
INFORMATICS
25
30
2012-2013
/ Güz
BIOLOGICAL DATABASES AND DATA
ANALYSIS TOOLS
24
30
2012-2013
/ Güz
PROTEIN AND DNA SEQUENCE
ANALYSIS
25
30
ESERLER
A. Uluslararası hakemli dergilerde yayımlanan makaleler : (9)
A1.
S.C. Yücebaş, Y. Aydın Son, "A Prostate Cancer Model Build by a Novel SVM-ID3
Hybrid Feature Selection Method Using Both Genotyping and Phenotype Data from
dbGaP", PLOS ONE , "9 (3)", 91404-91404 pp., Mart-2014
A2.
H.Gül, C. Açıkel, Y. Aydın Son, "Discovering missing heritability and early risk
prediction for type 2 diabetes; a new perspective for genome-wide association study
analysis with the Nurses Health Study and the Health Professionals Follow-Up Study",
Turkish Journal of Medical Sciences , "e", 1-30 pp., Ocak-2014
A3.
G.Üstünkar, S. Özöğür-Akyüz, G.-W. Weber, ,C. M. Friedrich and Y. Aydın Son,
"Selection of Representative SNP Sets for Genome-Wide Association Studies: A
Metaheuristic Approach", Optimization Letters , "6 (6)", 1207-1218 pp., Ağustos-2012
A4.
G.Üstünkar, Y. Aydın Son, "METU-SNP: An Integrated Software System for SNPComplex Disease Association Analysis", Journal of Integrative Bioinformatics,
"8(1):187", 1-18 pp., Aralık-2011
5 | Y .Aydın Son
A5.
J. M. Lehman, E.J. Michaud, T.R. Schoeb, Y. Aydin-Son, M. Miller, and B K.
Yoder, "The Oak Ridge Polycystic Mouse: Modeling Ciliopathies of Mice and Men",
Developmental Dynamics , "237 (8)", 1960-1971 pp., Ağustos-2008
A6.
C.J.Haycraft , B.Banizs , Y.Aydin-Son, Q. Zhang , E.J. Michaud , B.K. Yoder ,
"Gli2 and Gli3 Localize to Cilia and Require the Intraflagellar Transport Protein Polaris for
Processing and Function", PLOS Genetics , "1(4) e53", 480-488 pp., Ekim-2005
A7.
S. Balci, E. Aypar , Y.A. Son , M.S.Beksac, "Balanced de novo translocation
t(6;7)(p25;q31) and cleft palate as an isolated finding", Genetic Counseling , "15(3)",
317-320 pp., Şubat-2004
A8. S. Balci, G. Kanra, E. Aypar, Y.A.Son, "Twenty-nail dystrophy in a mother and her 7year-old daughter associated with balanced translocation 46, XX, t(6q13;10p13)",
Clinical Dysmorphology , "11(3)", 171-173 pp., Haziran-2002
A9.
S. Balci, M.E. Mavili, Y.A. Son, I. Vargel, K. Benli, Y. Erk , "A female patient with
frontonasal dysplasia sequence and frontonasal encephalocele", Annals of Plastic
Surgery , "43(4)", 457-459 pp., Ekim-1999
B. Uluslararası bilimsel toplantılarda sunulan ve bildiri kitabında (Proceedings)
basılan bildiriler : (4)
B1.
R. Çelebi., Ö. Gümüş., Y. Aydın Son, Semantic Web Applications and Tools for Life
Sciences (SWAT4LS 2013) konferansı dahilinde , "Proceedings of the 6th International
Workshop on Semantic Web Applications and Tools for Life Sciences", bildiri
kitapçığındaki "Weighting Indirect Relations to Elucidate the Direct Association of SNPDisease by Use of SPARQL Queries", 1-4 pp.,Edinburg, UK, Aralık, 2013
B2.
C.Gedikoğlu, L.Çarkacıoğlu, Y. Aydın Son, Benelux Bioinformatics Conference
konferansı dahilinde , "Proceedings of BeNeLux Bioinformatics Conference 2011", bildiri
kitapçığındaki ", iSNP: An Integrated, Automatically Updated SNP Database Server Over
Web", 28-28 pp.,Luxembourg, Luxembourg, Aralık, 2011
B3.
S. Özen, Y. Aydın Son, Y.Tuncel, E.Demirkaya, Y. Bilginer, C. Acikel, B. Volkan
Salancı ,Ö.Kasapçopur, E. Unsal, N. Beşbaş, M. Alikasifoglu, PRES 2011 konferansı
dahilinde , "Pediatric Rheumatology 2011 Supplemanteries", bildiri kitapçığındaki "A Pilot
Study For Genome Wide Association Study (GWAS) In Patients With Juvenile Idiopathic
Arthritis (JIA) And Their Parents", 152-152 pp.,Bruges, Belçika, Eylül, 2011
B4.
G. Üstünkar, S. Özöğür-Akyüz, G.-W. Weber, Y. Aydin Son, Annual International
Conference of German Operations Research Society (GOR) konferansı dahilinde ,
"Operations Research Proceedings 2010", bildiri kitapçığındaki "Analysis of SNP-Complex
Disease Association by a Novel Feature Selection Method", 21-26 pp.,Münih, Almanya,
Eylül, 2010
6 | Y .Aydın Son
C. Yazılan uluslararası kitaplar veya kitaplarda bölümler : (3)
C1.
Y. Aydın Son, P.Pevzner, R. Shamir (Çeviri Editörü: Z.Kaya), Bioinformaticsfor
Biologists
“Biyologlar
İçin
Biyoenformatik” (Hastalıkların
Genetik
Temellerinin
Tanımlanması),3-22 pp.,Ankara, Nobel, 2014
C2.
T.Beyan., Y. Aydın Son, N. Bessis, C. Dobre , Big Data and Internet of Things: A
Roadmap for Smart Environments (Emerging Technologies in Health Information
Systems: Genomics Driven Wellness Tracking and Management System (GOWELL)),315-339 pp.,Switzerland International Publishing, Springer, 2014
C3.
Y. Aydın Son ,Ş. Tüzmen, C. Hızel, D.Barh, D. Dhawan, and N.K. Ganguly, Omics
For Personalized Medicine(Designing and Implementing Pharmacogenomics Study),97122 pp.,India, Springer, 2013
D. Ulusal hakemli dergilerde yayımlanan makaleler : (2)
D1.
S. Tezcan, K,H. Altıntaş,Y. Aydın, İ. Çıkrıkçı, B.B. Doğu,G. Erdem, E. Kutsal ,
"Ankara Oran Sağlık Ocağı Bölgesine Bağlı İlköğretim Okullarında Çalışan Kadın
Öğretmenlerde Osteoporoz Risk Faktörlerinin Boyutunun Saptlanması.", Hacettepe
Toplum Hekimliği Bülteni , "20 (1)", 1-5 pp., 199
D2.
S. Tezcan, K,H. Altıntaş,Y. Aydın, İ. Çıkrıkçı, B.B. Doğu,G. Erdem, E. Kutsal , "Bir
halk Sağlığı Sorunu:Osteoporoz", Hacettepe Toplum Hekimliği Bülteni , "20(1)", 5-6 pp.,
1999
E. Ulusal bilimsel toplantılarda sunulan ve bildiri kitaplarında basılan bildiriler:
(6)
E1. R. Çelebi, Ö. Gümüş, Y. Aydın Son, 8th Health Informatics and Bioinformatics
International Symposıum konferansı dahilinde , " IEEE Xplore HIBIT’13", bildiri
kitapçığındaki "Use of Open Linked Data in Bioinformatics Space: A Case Study", 9-13
pp.,Ankara, Türkiye, Eylül, 2013
E2. O. Kadıoğlu, G.Üstünkar, Y.Aydın Son, 7th Health Informatics and Bioinformatics
International Symposıum konferansı dahilinde , "IEEE Xplore HIBIT’12", bildiri
kitapçığındaki "GWAS with AHP based SNP Prioritization Approach to Identify SNP
Biomarkers for Alzheimer’s Disease", 15-18 pp.,Kapadokya, Nisan, 2012
E3. Ş. Ünsal, M. Beyge, Y. Aydın Son, 7th Health Informatics and Bioinformatics
International Symposıum konferansı dahilinde , "IEEE Xplore HIBIT’12", bildiri
kitapçığındaki "Building Dicer1 Regulation Network Of Mouse Liver Hepatocytes", 101-107
pp.,Kapadokya, Nisan, 2012
E4. L. Çarkacıoğlu, C. Gedikoğlu, Y.Aydın Son, 7th Health Informatics and
Bioinformatics International Symposıum konferansı dahilinde , "IEEE Xplore HIBIT’12",
bildiri kitapçığındaki "iSNP: An Integrated, Automatically Updated Snp Database", 127130 pp.,Kapadokya, Nisan, 2012
E5. S. Hashemikhabir, G Ersoy, G.Oguz, B. Yaldiz, Y. Tuncel, G. Budak, S.Karaaslan, Y.
Aydın Son, T. Can. , 7th Health Informatics and Bioinformatics International Symposıum
konferansı dahilinde , "IEEE Xplore HIBIT’12", bildiri kitapçığındaki "M4B: A Novel Method
For Designing And Ordering Of The Genetic Constructs", 136-140 pp.,Kapadokya, Nisan,
2012
7 | Y .Aydın Son
E6. Y. Aydın Son, 4th International Congress on Psychopharmacology konferansı
dahilinde , "Bulletin of Clinical Psychopharmacology V 21 S2", bildiri kitapçığındaki
"Pharmacogenomic Biomarkers and Personalized Medicine in Psychiatry", 101-102
pp.,Antalya, Türkiye, Kasım, 2011
F. Diğer yayınlar :
F1. Kitap (Proceedings) Editörlüğü: Health Informatıcs And Bıoınformatıcs.
Internatıonal Symposıum Proceedıngs. 7th 2012. (Hıbıt 2012) Editors: Y.Aydın Son, T.
Can Year: April, 2012 Pages: 127, IEEE Xplore, ISBN: 9781467308793
F2. Bilimsel Toplantılarda Sunulan Posterler: (24)
1. Burcu Yaldız, Yeşim Aydın-Son, Investigation of Topological Properties of Human
Promoter CpG Islands. 8th International Conference on Health Informatics and
Bioinformatics, Sept 2013, Ankara, Turkey
2. Yeşim AYDIN SON, Alper Döm Investigation of Schizophrenia Related Genes
And Pathways Through Genome Wide Association Studies International
ISMB/ECCB Conference. July, 2013.Berlin, Germany
3. Gökçe Oğuz, Aybar Can Acar, Yeşim Aydın Son A Catalog of Cytokine SNPs and
Their Association with Specific Cancer Types International ISMB/ECCB Conference.
July, 2013.Berlin, Germany
4. Onur Erdoğan, Yeşim AYDIN SON A Decision Support Model Based on Integration of
Genomic and Clinical Findings for the Differential Diagnosis of Alzheimer’s Disease.
International ISMB/ECCB Conference. July, 2013.Berlin, Germany
5. Susanna Repo, Daniel Barsky, John Moult, Steven E. Brenner, CAGI participants
CAGI: The Critical Assessment of Genome Interpretation, a community experiment to
evaluate phenotype prediction, ASHG v05 31Oct2012
6. Hüsamettin GÜL, Cengizhan AÇIKEL, Yeşim AYDIN SON, Investigation of TCF7L2
Gene Polymorphism in Diabetic Patients Using Bioinformatic Methods., 9th National
Turkish Medical Informatics Congress in November 15-17, 2012, Antalya, Turkey
7. Zelha Nil, Yesim Aydın-Son, Mükerrem Safalı, Fikret Arpacı, Ufuk Gündüz,
Construction of a Workflow for Genome-Wide Variation Analysis of Formalin Fixed
Paraffin Embedded Tumor Samples, 7th International Conference on Health
Informatics and Bioinformatics, April 2012, Capadoccia, ,Turkey
8. Zelha Nil, Yesim Aydın-Son, Mükerrem Safalı, Fikret Arpacı, Ufuk Gündüz, GenomeWide Association Analysis of Formalin Fixed Paraffin Embedded Pulmonary Metastatic
Tumor Samples of Osteosarcoma Patients, 7th International Conference on Health
Informatics and Bioinformatics, April 2012, Capadoccia, ,Turkey
9. Yeşim Aydın Son, Evaluation Of Novel SNP Prioritization And Sub-Set Selection
Approaches For GWAS, BBC11, Benelux Bioinformatics Conference, 12-13 December
2011, Luxemburg
10.Onat Kadıoğlu, Gürkan Üstünkar, Yeşim Aydın Son, Application of AHP Based SNP
Biomarker Prioritization Approach to Identify Biomarkers for Alzheimer's Disease, 4th
International Congress on Psychopharmacology, 23-27 November 2011, Antalya,
Turkey
11.H.Alper Döm, M. Ali Döke, Y. Yener Tuncel, Gürkan Üstünkar, Yeşim Aydın Son,
Development of a SNP Genotyping Panel and a Medical Decision Support Algorithm
for Prediction of Drug Response in Schizophrenia, 4th International Congress on
Psychopharmacology, 23-27 November 2011, Antalya, Turkey
12.Seyedsasan Hashemikhabir, Gokhan Ersoy, Gokce Oguz, Burcu Yaldiz, Yener Tuncel,
Gungor Budak, Saygin Karaaslan, Yesim Aydın Son, Tolga Can. M4B:Mining for
BioBricks. iGEM 2012, Worldchampionship, 5-7 November 2012, MIT Cambridge, MA,
USA
13.Yeşim Aydın Son, Gürkan Üstünkar, AHP Based SNP Prioritization Approach to
Identify SNP Biomarkers for Pancreatic Cancer After GWAS, Bioinformatics for Anticancer Drug Discovery Workshop, 17-18 October 2011, Ankara, Turkey
8 | Y .Aydın Son
14.Y.Aydın Son, SNP Biomarker Prioritization for GWAS and Personilized Medicine, First
Scientific Meeting of BioHealth Computing, 12-13 July 2011, Archamps, France
15.Onat Kadıoğlu, Gürkan Üstünkar, Yeşim Aydın Son, GWAS of AD Genotyping data
with the AHP based SNP Prioritization Method, ICBB 2011, The International Congress
on Bioinformatics and Biomimetics, 18-22 May 2011, Kuşadası, Turkey
16.Kerem Yıldız, Yeşim Aydın Son, Algorithm Design for Scoring Of Effect Of 3 Prime
UTR SNPs on microRNA Binding, HIBIT ’11, 6th International Health Informatics and
Bioinformatics Symposium, 2-5 May 2011, İzmir, Turkey
17.Alper Döm, Yeşim Aydın Son, Prediction of Functional CpG Units On Promoter CpG
Islands HIBIT ’11, 6th International Health Informatics and Bioinformatics Symposium,
2-5 May 2011, İzmir, Turkey
18.Aydin Son Y., Michaud E.J., Differential Expression of Skin Cancer and Hair Growth
Cycle Related Genes in Tumor Susceptible K14-Agouti Mice. 4th International health
Informatics and Bioinformatics Symposium, HIBIT’09, April 2009, Ankara, Turkey
19.Miller M. J., Aydin Son Y., Yoder B.K., Michaud E. J., Skin & Hair Development:
Finding the Role of Tg737, Kif3a, & the Primary Cilium UT-ORNL Graduate School of
Genome Science and Technology Retreat, February 2005, Knoxville, TN
20.Aydin Son Y., Jones B.H., Hoyt P.R., Doktycz M.J., Culiat C.T., Michaud E.J. cDNA
Microaray Data Analysis and Validation of Regulated Genes in Tumor Susceptible K14Agouti Transgenic Mice. UT-ORNL Graduate School of Genome Science and
Technology Retreat, March 2003, Knoxville, TN
21.Michaud E.J., Snoddy J.R., Baker E.J., Aydin Son Y., Cain K.T., Carpenter D.J.,
Eastre, L.L., Foster C.M., Gardner A.W., Hamby K.S., Houser K.J., Lu, T.-Y.S.,
Olszewski R.E., Pinn I., Shaw, G.D., Shinpock, S.G., Wymore A.M., Johnson D.K.,
Culiat C.T., Rinchik E.M., Genome-Wide, Gene-Driven Chemical Mutagenesis for
Functional Genomics: The ORNL Cryopreserved Mutant Mouse Bank. DEO Genome
Workshop ıX, Oakland, California, Jan 27-31, 2002
22.Baker E.J., Hyatt P.D., Chen G.L., Schmoyer D., Aydin Son Y., McWilliams D., Baes
F., Kirov S., Galloway M., LeuzeM., Pouchard L., Jones B., Michaud E.J., Culiat C.T.,
Rinchik E.M., Johnson D.K., Uberbacher E., Miller D., Larimer F.W., Snoddy J.R.
Comparative and Collaborative Bioinformatics Systems to Promote Mammalian
Phenotype Analysis and the Elucidation of Regulatory Networks. DEO Genome
Workshop ıX, Oakland, California, Jan 27-31, 2002
23.O`Nuallian B., Aydin Son Y., Wetzel R. The Production of Monoclonal Antibodies that
bind to Disease Associated Amyloid Fibrils. UT-ORNL Graduate School of Genome
Science and Technology Retreat, May 2001, Knoxville, TN
24.Balci, S., Alikasifoglu, M., Gozdasoglu, S., Aydin Son Y., Gurgey, A. Two Cases of
Dyskeratosis Congenita with Renal Agenesis and Zinc Deficiency. European Human
Genetics Conference, May 2000, Amsterdam, The Netherlands
F3. Bilimsel Toplantı ve Çalıştaylarda Davetli Sunum (16)
1. Yeşim Aydın Son, Genetik ile Bilişimin Buluşması, Panelist , GenoFuture, 14 Mart
2014, Acıbadem Üniversitesi, İstanbul
2. Yeşim Aydın Son, Biyoenformatik ve Genomik Tıp, Konuşmacı, Biyoenformatik ve
Son Gelişmeler, 21 Şubat 2014, Gazi Üniversitesi Tıbbi Genetik ABD, Ankara
3. Yeşim Aydın Son, Biyoenformatik Yaz Okulu, Lise ve Lisans Öğrencileri, Eğitmen,
26-29 Auğustos and 2-6 Eylül, 2013, TUBİTAK, İGBAM, Gebze
4. Yeşim Aydın Son, Course on next Generation Sequence Analysis, Instructor, May
2013 European School of Human Genetics and İstanbul University DETAM,
Baltalimanı, İstanbul
5. Yeşim Aydın Son, Integrating Genotyping and Phenotype Data after GWAS, Oral
Presentation, 26 February 2013, METU-LCSB Health Informatics Summit, ODTÜ,
Ankara
6. Yeşim Aydın Son, Bioinformatics for Personalized Medicine Part I, Instructor,1st
International Certificate Program of Predictive And Personalized Medicine/Healthcare
In Daily Modern Medicine And Pharmacy, 13-16 September 2012, Eskişehir
9 | Y .Aydın Son
7. Yeşim Aydın Son, Bioinformatics for Personalized Medicine Part II, Instructor, 1st
International Certificate Program of Predictive And Personalized Medicine/Healthcare
In Daily Modern Medicine And Pharmacy, 13-16 September 2012, Eskişehir
8. Yeşim Aydın Son, Clinical and Translational Bioinformatics Workshop, Co-Chair and
Instructor, April 2012, HIBIT’12, 7th International Symposium on Health Informatics
and Bioinformatics, Kapadokya
9. Yeşim Aydın Son, GWAS with AHP based SNP Prioritization Approach to Identify SNP
Biomarkers for Alzheimer’s Disease April 2012, Oral Presentation, HIBIT’12, 7th
International Symposium on Health Informatics and Bioinformatics, Kapadokya
10.Yeşim Aydın Son, iSNP: An Integrated, Automatically Updated SNP Database Server
Over Web, Oral Presentation, 12-13 December 2011, BBC11, BeNeLux Bioinformatics
Conference, Luxemburg
11.Yeşim Aydın Son, Pharmacogenomic Biomarkers and Personalized Medicine in
Psychiatry, Oral Presentation, 23-27 November, 2011, Turkish Association for
Psychopharmacology, 4th International Congress on Psychopharmacology, Antalya,
12. G.Üstünkar, Y.Aydın Son, METU-SNP: An Integrated Software System for SNPComplex Disease Association Analysis, Oral Presentation, 2-5 May 2011,HIBIT ’11, 6th
International Health Informatics and Bioinformatics Symposium, Translational
Bioinformatics Workshop, İzmir
13.Yeşim Aydın Son. Blast and Beyond: Database Similarity Search Workshop,
Organizer and Instructor, May 2011, HIBIT’11, 6th International Symposium on Health
Informatics and Bioinformatics, İzmir
14.G. Üstünkar, S. Özöğür-Akyüz, G.-W. Weber and Y. Aydın Son, Analysis of SNPComplex Disease Association by a Novel Feature Selection Method, Oral Presentation,
Eylül 2010, International Conference Operations Research (OR), Munich
15.Yeşim Aydın Son, Bioinformatics Workshop, Chair and Instructor, Nisan 2010,
HIBIT’10, 5th International Symposium on Health Informatics and Bioinformatics,
Antalya
16.Aydin Son Y., Balci S. Two Cases of Dyskeratosis Congenita from Turkey: A 5-YearOld Male and a 19-Year-Old Male Patient with Dyskeratosis Congenita with Unilateral
Renal Agenesis, Zinc Deficiency of Hair and Unusual Dermatopathologic Findings. Oral
Presentation, May 1999, XXXV. National Pediatrics Congress, Ankara
F4. Bilimsel Toplantı Organizasyonu
MIE 2014, 25th European Medical Informatics Conference,Sep 2014, Istanbul,
Local Organizing Committee member
HIBIT 2013, International Symposium on Health Informatics and Bioinformatics, Sep
2013, Ankara
Organization Committee Member
METU-LCSB Health Informatics Summit, Feb 2013, Ankara
Chair
P4Medicine 2012, International Certificate Program of Predictive and Personalized
Medicine
Scientific Committee Member
HIBIT 2012, International Symposium on Health Informatics and Bioinformatics, Apr
2012, Cappadocia
Co-chair
ECCO 2012, 25th Conference of European Chapter on Combinatorial Optimization, Apr
2012, Antalya
Organization Committee Member
10 | Y .Aydın Son
IF ’11, Informatics Science Festival, June 2011, Ankara
Organization Committee Member
HIBIT 2010, International Symposium on Health Informatics and Bioinformatics, Apr
2010, Antalya
Organization Committee Member
F5. Atıflar
Web of Science tarafından taranan yayınlarıma 28.4.2014 itibari ile yapılan atıf sayısı :
397
Araştırmacı h-index: 3
11 | Y .Aydın Son